CDS

Accession Number TCMCG066C37719
gbkey CDS
Protein Id XP_034574184.1
Location join(48332013..48332093,48332215..48332272,48332372..48332424,48332561..48332789,48332875..48333010,48333164..48333212,48333645..48333773,48335260..48335385)
Gene LOC117838316
GeneID 117838316
Organism Setaria viridis

Protein

Length 286aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034718293.1
Definition E3 ubiquitin-protein ligase SDIR1 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category O
Description RING-like zinc finger
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K16283        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000209        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005789        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009414        [VIEW IN EMBL-EBI]
GO:0009415        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009787        [VIEW IN EMBL-EBI]
GO:0009789        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009967        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010647        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023056        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042175        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0098827        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901419        [VIEW IN EMBL-EBI]
GO:1901421        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1905957        [VIEW IN EMBL-EBI]
GO:1905959        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGCTTCGTGTTCCGGGGGAGCAGGGCGGACATCGAGGCCGGTGGTTTCCCGGGGTTCGCTCCCGACCGCCGCGCCATGCGAATTCATGCAGGGGGCAGGCCAGTGCATAGCAATTCCTTGGCTTTTCTTGTCACAGTACTTCTTTTGTTCATGGTACTGAACTCGCACCAGATGTCTCCCAATTTTTTGCTTTGGCTTGTCTTGGGAGTCTTCCTAATGGCCACGAGCCTTAGAATGTACGCCACATGCCAGCAGCTCCAAGCGCAGGCGCAAGCTCATGCTGCCGCTGCCAATGGTTTTCTTGGACACACTGAGCTGCGTGTGCATGTACCACCAACAATAGCCCTTGCGACAAGAGGCCGGTTGCAGAGCCTTAGACTTCAACTGGCACTTCTTGATCGCGAATTTGATGATTTAGACTATGATGCTCTGAGAGCTTTGGATGCTGACAATAGCCCGCATGCTCCTTCTATGAGTGAAGAAGAAATAAATGCTCTTCCTGTCTTCAAATACAAAGTTCAGGCACAAAAGGGGAATGCCTCTGCCCGAAAAAGTGATGGGCCATCTCAGCTATCAACTTCCTCCACTGGGTCTGGCAATGAGAAAAAGCAGGATGGTTTCAAAGCAGCAGATGGAACCAGCAAAACATCAGAGGATGAACTAACATGCAGTGTTTGCTTGGAGCAAGTCGCTGTGGGTGATCTGTTGAGAAGCCTACCATGTTTGCATCAGTTCCACGTAAACTGCATCGACCCATGGCTGCGCCAACAGGGTACATGCCCAATCTGCAAGCACCAGGTCAGTGATGGGTGGCATGGCACAGGAAATGGCGAAGAGGATGCTTCTTACATGGTGTAA
Protein:  
MSFVFRGSRADIEAGGFPGFAPDRRAMRIHAGGRPVHSNSLAFLVTVLLLFMVLNSHQMSPNFLLWLVLGVFLMATSLRMYATCQQLQAQAQAHAAAANGFLGHTELRVHVPPTIALATRGRLQSLRLQLALLDREFDDLDYDALRALDADNSPHAPSMSEEEINALPVFKYKVQAQKGNASARKSDGPSQLSTSSTGSGNEKKQDGFKAADGTSKTSEDELTCSVCLEQVAVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQVSDGWHGTGNGEEDASYMV